No Problem! iDevAffiliate integrates with nearly any cart/checkout or billing system in the world. Please contact us and we'll let you know how the system you're using can be integrated with iDevAffiliate for commission processing.
Custom integrations can be done to achieve nearly any commissioning requirements you have including recurring and lifetime commissioning as well as per-product commissioning, products excludes, etc.
Don't see your cart system in the list? It's possible we can build an integration for you.